Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCGGCTCGCGTGCTTCTGAGCTGCT
..(((((((((((((.(((((&))))))))).))).........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349146
GeneSymbolB3GALNT1
Binding site837,866
Score0.846
Seed1
Au0.412
Energy-21.2
Binding len29
Me-5.19
Phylopstem0.1373827782608696
Phylopflank0.13682471750000003
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end7
Position5UTR
2D Structure