Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCTGTATGTCAA
...(((((((((..((((((..&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_170731
GeneSymbolBDNF
Binding site3703,3719
Score0.846
Seed0
Au0.632
Energy-16.7
Binding len16
Me-8.661
Phylopstem7.035012222222223
Phylopflank6.810394499999999
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure