Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGAGCAGGTTGGGAGCCAAATGTGG
(((((((((((((((((((...&))))))))......))))))))...))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_170731
GeneSymbolBDNF
Binding site2901,2930
Score0.846
Seed1
Au0.559
Energy-24.0
Binding len29
Me-3.938
Phylopstem4.64331476
Phylopflank6.8269445499999994
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end5
Position3UTR
2D Structure