Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGAGCAGGTTGGGAGCCAAATGTGG
(((((((((((((((((((...&))))))))......))))))))...))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_170732
GeneSymbolBDNF
Binding site2715,2744
Score0.846
Seed1
Au0.559
Energy-24.0
Binding len29
Me-3.938
Phylopstem4.866285
Phylopflank6.229133162499999
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end5
Position3UTR
2D Structure