Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAACCCAGAAACACCTAGATCAGAACAGGAATCCACATTGCCAGTGA
(((((((((((((((((((.((&)).))))))))................)))).........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_170734
GeneSymbolBDNF
Binding site2203,2251
Score1.0
Seed1
Au0.544
Energy-25.3
Binding len48
Me-3.938
Phylopstem2.8067082954545453
Phylopflank1.57573674125
Longest consecutive pairings8
Position of longest consecutive pairings37
Pairings in 3prime end7
Position3UTR
2D Structure