Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGAGCAGGTTGGGAGCCAAATGTGG
(((((((((((((((((((...&))))))))......))))))))...))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_170734
GeneSymbolBDNF
Binding site2568,2597
Score0.923
Seed1
Au0.559
Energy-24.0
Binding len29
Me-3.938
Phylopstem3.3854323571428577
Phylopflank5.621932003749999
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end5
Position3UTR
2D Structure