Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACAATCTATTTATTGGACATGTCCATGACCAGAAGGGAAACAGTC
.((((..((((((((((.....&.))))))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_170734
GeneSymbolBDNF
Binding site1193,1241
Score0.923
Seed0
Au0.618
Energy-23.2
Binding len18
Me-7.238
Phylopstem0.5241427
Phylopflank0.5513217037500001
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end3
Position3UTR
2D Structure