Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCAACCCAGAAACACCTAGATCAGAACAGGAATCCACATTGCCAGTGA
(((((((((((((((((((.((&)).))))))))................)))).........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_170735
GeneSymbolBDNF
Binding site2990,3038
Score0.923
Seed1
Au0.544
Energy-25.3
Binding len48
Me-3.938
Phylopstem5.317961022727272
Phylopflank6.307174099999999
Longest consecutive pairings8
Position of longest consecutive pairings37
Pairings in 3prime end7
Position3UTR
2D Structure