Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGAGCAGGTTGGGAGCCAAATGTGG
(((((((((((((((((((...&))))))))......))))))))...))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_170735
GeneSymbolBDNF
Binding site3355,3384
Score0.846
Seed1
Au0.559
Energy-24.0
Binding len29
Me-3.938
Phylopstem6.363968249999999
Phylopflank4.948110969625
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end5
Position3UTR
2D Structure