Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCCCACCAACTCCCAGATTTCAAAGGAGGTAGTTGCAAA
(((((((((((((.((((((.&))))))...))).....................)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170739
GeneSymbolMRPL11
Binding site768,812
Score0.846
Seed1
Au0.456
Energy-20.6
Binding len44
Me-4.794
Phylopstem0.14430123823529414
Phylopflank0.07836284125000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure