Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACTTGGAAAGGCATCAGTTG&TAATTGATGCCTTTATTGTCCCAAA
...((((((((((((((((((&))))))))))))))......)))).
Details
MiRNAhsa-miR-890
RefseqIDNM_170740
GeneSymbolALDH5A1
Binding site2289,2314
Score0.808
Seed0
Au0.721
Energy-19.5
Binding len25
Me-6.515
Phylopstem-0.3443360166666667
Phylopflank-0.11802591750000001
Longest consecutive pairings14
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure