Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GATGGCAGCTGTAAT
((((((((((.(((.......&))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170742
GeneSymbolKCNJ16
Binding site466,481
Score1.0
Seed1
Au0.603
Energy-19.9
Binding len15
Me-7.731
Phylopstem4.66052449
Phylopflank2.4584778600000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure