Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGGCTGCAGTTGCAGG
(((((((((((((..((((((&)))))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170743
GeneSymbolIFNLR1
Binding site3132,3153
Score0.846
Seed1
Au0.353
Energy-27.8
Binding len21
Me-5.53
Phylopstem-0.3028158384615385
Phylopflank0.5456600699999998
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure