Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGAGAGGGGCGGA
...(.(((((((((((((....&))))).)))))))).).
Details
MiRNAhsa-miR-892b
RefseqIDNM_170769
GeneSymbolRNF39
Binding site33,50
Score0.923
Seed0
Au0.441
Energy-22.1
Binding len17
Me-10.634
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings3
Pairings in 3prime end4
Position5UTR
2D Structure