Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTTGCTGCTCTGTTGCCCAGGCTGGAGTACAGTGG
((((((((((..(((((((((.&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349150
GeneSymbolB3GALNT1
Binding site839,875
Score0.846
Seed1
Au0.441
Energy-28.9
Binding len24
Me-10.109
Phylopstem0.0010969363636363601
Phylopflank0.15286706625000002
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position5UTR
2D Structure