Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAAGTGACCCTGTTTCAAAACAGGAATAGAACTGCAGTATGCAAG
((((((((((((((.((....&.)).))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170780
GeneSymbolCD200R1
Binding site701,750
Score0.923
Seed1
Au0.515
Energy-20.5
Binding len20
Me-4.673
Phylopstem0.06385168
Phylopflank0.14043055625
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end3
PositionCDS
2D Structure