Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTTTACAGGGATCGCAATAGTAACTGTCTGCTTGTGGTAGTAGAAAGCTTGTGCCAGGC
.((((((((((((.((((((..&.))))))))))...............)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_170782
GeneSymbolKCNN3
Binding site6163,6224
Score0.846
Seed1
Au0.603
Energy-21.2
Binding len35
Me-4.65
Phylopstem0.37172797407407404
Phylopflank-0.19780115999999992
Longest consecutive pairings10
Position of longest consecutive pairings24
Pairings in 3prime end6
Position3UTR
2D Structure