Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTATAGCCACAATGCTGCAT
.((((((((.(((((((((((&))))))))))).))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_170784
GeneSymbolMKKS
Binding site623,646
Score0.846
Seed1
Au0.75
Energy-21.5
Binding len23
Me-5.036
Phylopstem1.351806214727273
Phylopflank0.20173569685
Longest consecutive pairings11
Position of longest consecutive pairings12
Pairings in 3prime end8
Position5UTR
2D Structure