Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCGCTGCGTTGCTGTGCCGC
...(((((((((((((((....&.)))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_171825
GeneSymbolCAMK2A
Binding site1597,1620
Score0.923
Seed0
Au0.338
Energy-19.8
Binding len18
Me-6.515
Phylopstem1.73025
Phylopflank1.7795999999999996
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure