Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCAAACTTTCTGCTATTGGGGGGGGCGGGTGG
((((.(((((((((..((((((&.))))))...))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_171825
GeneSymbolCAMK2A
Binding site4697,4733
Score1.0
Seed0
Au0.471
Energy-27.2
Binding len25
Me-9.025
Phylopstem0.571512
Phylopflank1.28792537
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end6
Position3UTR
2D Structure