Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTCCAGGAAGGCGGGGGGCTTCTAATGGCTGCAGCTGCGC
.(((((((((((((((.(((.&.))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_171828
GeneSymbolKCNMB3
Binding site177,221
Score0.923
Seed1
Au0.279
Energy-25.5
Binding len21
Me-3.793
Phylopstem-0.09021995999999996
Phylopflank0.1904467775
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure