Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGAGCTGGAGGGTGGGCGTGGTACGTGTGCGCCAGGA
.((((((.(((.(((((.....&.)))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_171982
GeneSymbolTRIM35
Binding site1129,1170
Score0.846
Seed1
Au0.309
Energy-18.8
Binding len17
Me-9.454
Phylopstem-0.36358045
Phylopflank0.05758863500000002
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure