Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCTTTGACCCCAACACCGCAGCTGG
...(((((((((.(((..(((&.)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_171982
GeneSymbolTRIM35
Binding site944,975
Score0.923
Seed0
Au0.412
Energy-23.0
Binding len20
Me-7.804
Phylopstem-0.18149805555555554
Phylopflank-0.46848416125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure