Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCGGCCGCGCTCCCCTCTCTCCCCGTCCCTGCTGCT
..(((((((((((((((....&)))))))))).....................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_171997
GeneSymbolUSP2
Binding site286,323
Score0.846
Seed1
Au0.294
Energy-20.6
Binding len37
Me-4.957
Phylopstem0.5363603544444443
Phylopflank0.48747125650000006
Longest consecutive pairings10
Position of longest consecutive pairings27
Pairings in 3prime end4
PositionCDS
2D Structure