Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGGATTGTAGCCAGT
..(((((.((((((.((((...&)))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_171998
GeneSymbolRAB39B
Binding site2406,2423
Score0.846
Seed0
Au0.618
Energy-17.4
Binding len17
Me-8.006
Phylopstem-0.19523622834999999
Phylopflank0.54163206299
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure