Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTCTGAAAAGAGCCC
....(((((.((((.((((((.&))))))..)))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_171998
GeneSymbolRAB39B
Binding site1686,1705
Score0.923
Seed0
Au0.485
Energy-20.8
Binding len19
Me-11.525
Phylopstem-0.02771776666666668
Phylopflank-0.015923237500000104
Longest consecutive pairings6
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure