Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGTGGCAGCTGCAGCCGTGCC
..((((((((((((((.(.((&)).).)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_171999
GeneSymbolSALL3
Binding site1043,1065
Score0.846
Seed1
Au0.309
Energy-22.6
Binding len22
Me-4.957
Phylopstem1.4537534375
Phylopflank3.0715988037500006
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure