Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCCGAGTGTAAAGTCTTGCTGCTCTGTTGCCCAGGCTGGAGTACAGTGG
((((((((((..(((((((((.&.)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001349152
GeneSymbolB3GALNT1
Binding site715,768
Score0.923
Seed1
Au0.441
Energy-28.9
Binding len24
Me-10.109
Phylopstem-0.014459245454545465
Phylopflank-0.20648112625000004
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position5UTR
2D Structure