Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCAACTGCAGCG
.....(((((((((((..(((&))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172002
GeneSymbolHSCB
Binding site337,353
Score1.0
Seed0
Au0.456
Energy-21.5
Binding len16
Me-13.666
Phylopstem-0.21137010000000006
Phylopflank-0.166885932125
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure