Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGAAGGAGACCGCTAAGCTGCGAT
((((((((((((((.......&.))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172002
GeneSymbolHSCB
Binding site118,144
Score0.923
Seed1
Au0.382
Energy-21.1
Binding len18
Me-4.906
Phylopstem-0.5423487499999999
Phylopflank0.005801147750000013
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure