Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCGGGCAGGCCGGGAGTGGCGTGCTGGGCGTGCGCGGCTGCGGT
(((((((((((..(((..(((&.)))..)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172003
GeneSymbolCBWD2
Binding site77,124
Score0.923
Seed1
Au0.265
Energy-22.6
Binding len23
Me-8.574
Phylopstem-0.5571456454545454
Phylopflank-0.4650042025000002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure