Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGTTACGATTGCCTGCGTTTAGGAGGTGGCTGCGT
.(((((((((((((((((.(.&).))))))))))...............))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001349152
GeneSymbolB3GALNT1
Binding site451,486
Score0.846
Seed1
Au0.515
Energy-19.2
Binding len35
Me-3.793
Phylopstem0.130419059375
Phylopflank0.17919978625
Longest consecutive pairings10
Position of longest consecutive pairings23
Pairings in 3prime end6
Position5UTR
2D Structure