Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGCTGCTCTGTGTGCCTGGA
.((.((((((((..((((.(((&)))))))..)))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_172016
GeneSymbolTRIM39
Binding site706,727
Score0.923
Seed0
Au0.485
Energy-20.1
Binding len21
Me-8.971
Phylopstem3.9601572499999995
Phylopflank2.714476932
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure