Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAAGCGGGCTGCGC
.(((((((.((.(((((((..&))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172037
GeneSymbolRDH10
Binding site23,41
Score1.0
Seed1
Au0.265
Energy-22.9
Binding len18
Me-8.197
Phylopstem-0.3237882857142858
Phylopflank0.40897991692307695
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure