Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCGTCATGCTCATTGGCTCCCTCATGTATGCTAGC
..((((((((((((((((((..&))))))))....................)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_172056
GeneSymbolKCNH2
Binding site2324,2363
Score0.846
Seed1
Au0.471
Energy-18.8
Binding len39
Me-4.957
Phylopstem1.2680296865789473
Phylopflank0.951205964875
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure