Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCAGCCGCTGGCTGTGGT
(((((((((((((((..((((&))))..))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172057
GeneSymbolKCNH2
Binding site622,645
Score0.846
Seed1
Au0.412
Energy-26.3
Binding len23
Me-4.171
Phylopstem0.27347103125000005
Phylopflank0.49341185625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure