Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGAACTGGAGTACCTGTAAC
((((((((.(((((.((((((&)))))).))))).))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172058
GeneSymbolEYA1
Binding site2004,2029
Score0.846
Seed1
Au0.412
Energy-21.4
Binding len25
Me-5.729
Phylopstem5.623961818181818
Phylopflank5.3035054729999995
Longest consecutive pairings6
Position of longest consecutive pairings19
Pairings in 3prime end7
PositionCDS
2D Structure