Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAAATCTGCCTGACACATCCTGAGCTGCAGA
((((((((..((.(((.((((&.))))...))).))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172069
GeneSymbolPLEKHH2
Binding site3138,3175
Score0.923
Seed1
Au0.574
Energy-22.2
Binding len25
Me-7.526
Phylopstem8.2910725
Phylopflank5.0231774087500005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure