Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTGGGAGGGGAGGCCAGG
..(((((((((((((.(((...&))).))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_172080
GeneSymbolCAMK2B
Binding site2823,2842
Score0.846
Seed1
Au0.382
Energy-25.6
Binding len19
Me-5.19
Phylopstem0.5519544
Phylopflank0.2158597725
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end4
Position3UTR
2D Structure