Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAACAGCTGCTATAGCGCAGG
((((.(((((((((((.((((&))))...))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172087
GeneSymbolTNFSF13
Binding site860,886
Score0.846
Seed0
Au0.441
Energy-20.7
Binding len26
Me-8.057
Phylopstem-0.10383504285714287
Phylopflank-0.5692715124999999
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure