Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGGAGAATGGGGAGAGATCCCGGAAAAGGAGAGCAGTGC
(((((.((((((((((((....&.)))))))).))))..))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_172088
GeneSymbolTNFSF13
Binding site568,609
Score1.0
Seed0
Au0.471
Energy-24.8
Binding len22
Me-5.839
Phylopstem0.863142476923077
Phylopflank0.8285396474999999
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end4
PositionCDS
2D Structure