Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAACAGCTGCTATAGCGCAGG
((((.(((((((((((.((((&))))...))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172088
GeneSymbolTNFSF13
Binding site908,934
Score0.923
Seed0
Au0.441
Energy-20.7
Binding len26
Me-8.057
Phylopstem1.208616692857143
Phylopflank1.1813838637500003
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure