Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCTTGAAACCACAGCTGTT
..(((((((.((((.((((((&)).)))).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172088
GeneSymbolTNFSF13
Binding site252,273
Score0.846
Seed1
Au0.397
Energy-20.3
Binding len21
Me-6.935
Phylopstem0.1574927142857143
Phylopflank-0.06906775624999995
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure