Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATGCGGGGAGGCTGCGTGTGTGCGCAGGG
.((((((((((.((((((..((&.))..)))))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001349159
GeneSymbolB3GALNT1
Binding site29,60
Score0.846
Seed1
Au0.279
Energy-21.9
Binding len23
Me-7.14
Phylopstem0.48179344545454533
Phylopflank0.2544950558333333
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end6
Position5UTR
2D Structure