Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTACAACAGCTGCTATAGCGCAGG
((((.(((((((((((.((((&))))...))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172089
GeneSymbolTNFSF12-TNFSF13
Binding site954,980
Score1.0
Seed0
Au0.441
Energy-20.7
Binding len26
Me-8.057
Phylopstem0.6687214071428571
Phylopflank1.0122439175
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure