Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCAACCTCTACTGCC
..((((..(.((((((.(((.&))))))))).)..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172095
GeneSymbolCATSPER2
Binding site2495,2513
Score0.846
Seed0
Au0.544
Energy-18.2
Binding len18
Me-10.057
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure