Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CGCCACGATGCGGCCGCGGCTGTGG
..(((((((((((((((..((&.))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172101
GeneSymbolCD8B
Binding site14,39
Score0.923
Seed1
Au0.279
Energy-28.3
Binding len21
Me-4.957
Phylopstem0.23539159333333334
Phylopflank0.19259714
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure