Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CGCCACGATGCGGCCGCGGCTGTGG
..(((((((((((((((..((&.))..))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172102
GeneSymbolCD8B
Binding site14,39
Score0.923
Seed1
Au0.279
Energy-28.3
Binding len21
Me-4.957
Phylopstem0.1266461
Phylopflank-0.10633808597222223
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure