Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCCAGCTGTG
..(((((((.(((((..((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172106
GeneSymbolKCNQ2
Binding site3878,3895
Score0.923
Seed1
Au0.338
Energy-22.3
Binding len17
Me-6.433
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure