Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCTACCGCAAGCTGCAGA
(((((((((((((.(.(((((&)))))).)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_172107
GeneSymbolKCNQ2
Binding site405,427
Score1.0
Seed1
Au0.382
Energy-27.3
Binding len22
Me-5.027
Phylopstem2.343598914285714
Phylopflank1.48453314125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure